Author(s)
Eleanor Williams
Published 3 Projects
Bioinformatics Among Other Features It Indexes Molecular Biology
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Video Abstract (AI generated) (01:12) Paper Preprint Nature MethodsAccess to primary research data is vital for the advancement of science. To extend the data types supported by community repositories, we built a prototype Image Data Resource (IDR) that collects and integrates imaging data acquired across many different imaging modalities. IDR links high-content screening, super-resolution microscopy, time-lapse and digital pathology imaging experiments to public genetic or chemical databases, and to cell and tissue phenotypes expressed using controlled ontologies. Using this integration, IDR facilitates the analysis of gene networks and reveals functional interactions that are inaccessible to individual studies. To enable re-analysis, we also established a computational resource based on IPython notebooks that allows remote access to the entire IDR. IDR is also an open source platform that others can use to publish their own image data. Thus IDR provides both a novel on-line resource and a software infrastructure that promotes and extends publication and re-analysis of scientific image data.
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Eleanor Williams. (2021, Oct 31).The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination[Video]. Scitok. https://scitok.com/project/p/e697ac30
Williams Eleanor. "The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination" Scitok, uploaded by Williams Eleanor, 31 Oct, 2021, https://scitok.com/project/pe697ac30
Eleanor Williams. "The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination" Scitok. (Oct 31, 2021). https://scitok.com/project/p/e697ac30
Eleanor Williams (Oct 31, 2021). The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination Scitok. https://scitok.com/project/p/e697ac30
Eleanor Williams. The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination[video]. 2021 Oct 31. https://scitok.com/project/p/e697ac30
@online{al2006link, title={ The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination }, author={ Williams, Eleanor }, organization={Scitok}, month={ Oct }, day={ 31 }, year={ 2021 }, url = {https://scitok.com/project/p/e697ac30}, }